entry.c: update cache_changed if refresh_cache is set in checkout_entry()

Other fill_stat_cache_info() is on new entries, which should set
CE_ENTRY_ADDED in cache_changed, so we're safe.

Signed-off-by: Nguyễn Thái Ngọc Duy <pclouds@gmail.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>

builtin/checkout-index.c

@@ -135,6 +135,7 @@ static int option_parse_u(const struct option *opt,
 	int *newfd = opt->value;
 
 	state.refresh_cache = 1;
+	state.istate = &the_index;
 	if (*newfd < 0)
 		*newfd = hold_locked_index(&lock_file, 1);
 	return 0;