cocci: apply the "commit.h" part of "the_repository.pending"

Apply the part of "the_repository.pending.cocci" pertaining to
"commit.h".

Signed-off-by: Ævar Arnfjörð Bjarmason <avarab@gmail.com>
Signed-off-by: Junio C Hamano <gitster@pobox.com>

tree.c

@@ -58,7 +58,7 @@ int read_tree_at(struct repository *r,
 				    oid_to_hex(&entry.oid),
 				    base->buf, entry.path);
 
-			if (parse_commit(commit))
+			if (repo_parse_commit(the_repository, commit))
 				die("Invalid commit %s in submodule path %s%s",
 				    oid_to_hex(&entry.oid),
 				    base->buf, entry.path);